PubMed: Part 2

In PubMed: Part 1, I explained why using PubMed to search for answers to medical questions is helpful. Now I'll describe how to use its advanced search functionality as I promised.

The default search form is located at the top of the page and looks like this:

PubMed Search form

When you click on "Advanced", you get this form:

PubMed search form with advanced controls

Clicking on either of the "All Fields" menus will give you the same choices:

PubMed: All Fields dropdown in advance search form

Say I want to look up articles which studied yoga. I could type "yoga" in the input field and click on the Search button but that would give me the same results as the default form.

PuMed search for yoga, default behavior

Click on the image above for the latest results. It changes as more articles are added to the PubMed database.

As I scroll down, I see a result titled, "Humor":

PubMed result for search term yoga

Humor? I click on it and get this:

"Humor" article as a result of search for the term yoga

The term "yoga" is not in the title and it's not even in the abstract. While the article appears to be interesting and fun, I really just want to see articles specifically studying yoga. So this time, I'm going to use the advanced features and click "Title" in the first All Fields dropdown menu.

PubMed All Fields dropdown menu with Title highlighted

When I click the Search button, only articles with the word "yoga" in the title are listed. Click on the image above to see for yourself.

Wow. My resulting search yields 1,381 articles. I like yoga but that's a lot. I think I just want the ones which were published this year.

So I go back to the advanced search form and use the second All Fields dropdown menu. There are several fields for a date search. I choose the "Date - Publication" one.

PubMed search form with "Date - Publication" highlighted in the second All Fields dropdown

When I choose it, I get two date fields:

PubMed advanced search form showing the date fields for Date-Publication

I type "2014/01/01" in the first date field and "2014/12/31" in the second one:

PubMed advanced search form with dates for Date - Publication field

I could've typed in "present" in the second date field instead of entering a date. When I do that, I receive results for articles published in 2015. Since today is Dec 19, 2014, it feels like a time machine. Note how a third All Fields dropdown menu appears in case my search isn't narrow enough. I click on the Search button before deciding that.

This time I get 204 results. Now that's doable. If you click on the image above, you'll see what I mean.

Once you're comfortable using PubMed's advanced search, you'll start to notice some of the goodies. Remember the image with 2,825 results? On the right, you'll see the graph, "Results by year":

PubMed graph for term "yoga" results by year: more researchers are publishing articles about yoga

The graph shows how many of the articles listed in your search were published in a given year ordered by year ascending. As the graph shows, more and more labs are studying yoga each year. "Download CSV" means you can download the CSV (Comma Separated Values) data used for the graph. You can open CSV files in a spreadsheet application like Excel or Numbers.

Under the graph is another goody. "Related searches" lists search terms which you might find helpful in your quest for knowledge.

Another useful goody is the "History" of your searches. You can find this on either the advanced search form or in the lower right of your search results where it's listed as "Recent Activity".

PubMed advanced search form with the History table which lists past searches

There are more PubMed goodies, but I left them for you to discover for yourself. Happy searching!

 

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